The following is a list of Sites of Special Scientific Interest in the Shetland Area of Search. For other areas, see List of SSSIs by Area of Search.

• Aith Meadows
• Balta
• Breckon
• Burn of Aith
• Burn of Lunklet
• Burn of Valayre
• Catfirth
• Clothister Hill Quarry
• Crussa Field and The Heogs
• Culswick Marsh
• Dales Voe
• Dalsetter
• East Mires and Lumbister
• Easter Loch
• Easter Rova Head
• Eshaness Coast
• Fair Isle
• Fidlar Geo to Watsness
• Foula
• Foula Coast
• Fugla Ness - North Roe
• Funzie
• Graveland
• Gutcher
• Ham Ness
• Hascosay
• Hermaness
• Hill of Colvadale and Sobul
• Keen of Hamar
• Kergord Plantations
• Lamb Hoga
• Laxo Burn
• Loch of Clousta
• Loch of Girlsta
• Lochs of Kirkigarth and Bardister
• Lochs of Spiggie and Brow
• Lochs of Tingwall and Asta
• Lunda Wick
• Melby
• Mousa
• Muckle Roe Meadows
• Ness of Clousta - The Brigs
• Ness of Cullivoe
• North Fetlar
• North Roe Meadow
• North Sandwick
• Norwick
• Norwick Meadows
• Noss
• Otterswick
• Papa Stour
• Pool of Virkie
• Punds to Wick of Hagdale
• Quendale
• Qui Ness to Pund Stacks
• Quoys of Garth
• Ramna Stacks and Gruney
• Ronas Hill
• Sandness Coast
• Sandwater
• Saxa Vord
• Sel Ayre
• Skelda Ness
• Skeo Taing to Clugan
• South Whiteness
• St Ninians Tombolo
• Sumburgh Head
• The Ayres of Swinister
• The Cletts, Exnaboe
• The Vadills
• Tingon
• Tonga Greff
• Tressa Ness to Colbinstoft
• Trona Mires
• Uyea, North Roe Coast
• Valla Field
• Villains Of Hamnavoe
• Virva
• Voxter Voe and Valayre Quarry
• Ward of Culswick
• Yell Sound Coast