黄杆菌属
黄杆菌属(学名:)為黄杆菌目黄杆菌科的一属好氧或兼性厌氧发酵型革兰氏阴性杆菌。直杆状,端圆。广泛分布在土壤和水中,在生肉、乳类和其他食物以及医院环境和人类的临床标本中都有检出。此属的模式种为水生黄杆菌(Flavobacterium aquatile)。
黄杆菌属 | |
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科学分类 | |
域: | 细菌域 Bacteria |
界: | 细菌界 Bacteria |
门: | 擬桿菌門 Bacteroidota |
纲: | 擬桿菌綱 Bacteroidia |
目: | 黄杆菌目 Flavobacteriales |
科: | 黄杆菌科 Flavobacteriaceae |
属: | 黄杆菌属 Flavobacterium Bergey et al,1923 |
模式種 | |
水生黄杆菌 Flavobacterium aquatile (Frankland and Frankland 1889) Bergey et al. 1923 | |
異名 | |
Bacillus aquatilis Frankland and Frankland 1889 |
下属物种
本属包括以下物种:[1]
- Flavobacterium acidificum Steinhaus 1941
- Flavobacterium aciduliphilum Kang et al. 2013
- Flavobacterium acidurans Millar 1973
- Flavobacterium aestivum Jo et al. 2023[2]
- Flavobacterium aquiphilum Jo et al. 2023[2]
- Flavobacterium ahnfeltiae Nedashkovskaya et al. 2015
- 栖阿卡亚黄杆菌 Flavobacterium akiainvivens Kuo et al. 2013
- Flavobacterium album Baek et al. 2018
- 居藻黄杆菌 Flavobacterium algicola Miyashita et al. 2010
- Flavobacterium algoritolerans Yin et al. 2023[3]
- Flavobacterium alkalisoli Xu et al. 2020[4]
- Flavobacterium alvei Lee and Jeon 2018
- Flavobacterium amnicola Sheu et al. 2019
- Flavobacterium amnigenum Patil et al. 2019
- Flavobacterium amniphilum Sheu et al. 2017
- 安纳托利亚黄杆菌 Flavobacterium anatoliense Kacagan et al. 2013,异名
- 安徽黄杆菌 Flavobacterium anhuiense Liu et al. 2008
- 橙黄徽黄杆菌 Flavobacterium antarcticum Yi et al. 2005
- Flavobacterium aquariorum Joung et al. 2020
- Flavobacterium aquaticum Subhash et al. 2013
- 水生黄杆菌 Flavobacterium aquatile (Frankland and Frankland 1889) Bergey et al. 1923
- Flavobacterium aquicola Hatayama et al. 2016
- 硬水黄杆菌 Flavobacterium aquidurense Cousin et al. 2007
- Flavobacterium aquimarinum Kristyanto et al. 2018
- Flavobacterium araucananum Kämpfer et al. 2012
- Flavobacterium arcticum Li et al. 2017
- Flavobacterium ardleyense Zhou et al. 2017
- 芳香黄杆菌 Flavobacterium aromatium
- Flavobacterium arsenatis Ao et al. 2014
- Flavobacterium arsenitoxidans Khianngam et al. 2015
- Flavobacterium artemisiae Zhao et al. 2018
- Flavobacterium aurantiibacter Cai et al. 2018
- Flavobacterium autothermophilum Goto et al. 1978
- 大比目鱼黄杆菌 Flavobacterium balustinum Harrison 1929,异名
- Flavobacterium banpakuense Kim et al. 2011
- 北部湾黄杆菌 Flavobacterium beibuense Fu et al. 2011
- Flavobacterium bizetiae Mühle et al. 2021
- Flavobacterium bomense Liu et al. 2019,也拼作:Flavobacterium bomensis
- Flavobacterium branchiarum Zamora et al. 2016
- Flavobacterium branchiicola Zamora et al. 2016
- 嗜枝黄杆菌 Flavobacterium branchiophilum Wakabayashi et al. 1989,嗜鳍黄杆菌,也拼作Flavobacterium branchiophila
- 短黄杆菌 Flavobacterium breve (ex Lustig 1890) Holmes and Owen 1982,异名
- Flavobacterium brevivitae Chen et al. 2016
- 北京化工大学黄杆菌 Flavobacterium buctense Feng et al. 2016
- 淤泥黄杆菌 Flavobacterium caeni Liu et al. 2010
- Flavobacterium capsulatum Leifson 1962,为Novosphingobium capsulatum (Leifson 1962) Takeuchi et al. 2001的异名
- Flavobacterium caseinilyticum Chaudhary et al. 2020
- Flavobacterium cauense Qu et al. 2009
- Flavobacterium cellulosilyticum Chaudhary et al. 2020
- Flavobacterium cerinum Zhang et al. 2019
- 鲸黄杆菌 Flavobacterium ceti Vela et al. 2007,为Myroides ceti (Vela et al. 2007) García-López et al. 2020的异名
- 陈氏黄杆菌 Flavobacterium cheniae Qu et al. 2008,陈文新氏黄杆菌,以陈文新的名字命名
- Flavobacterium cheonanense Lee et al. 2012
- Flavobacterium cheongpyeongense Joung et al. 2019
- Flavobacterium cheonhonense Lee et al. 2014
- Flavobacterium chilense Kämpfer et al. 2012
- Flavobacterium chryseum Králová et al. 2018
- Flavobacterium chuncheonense Park et al. 2017
- Flavobacterium chungangense Kim et al. 2009
- Flavobacterium chungbukense Lim et al. 2011
- Flavobacterium chungnamense Lee et al. 2012
- Flavobacterium circumlabens Králová et al. 2019
- Flavobacterium cloacae Liu et al. 2017,为Myroides cloacae (Liu et al. 2017) García-López et al. 2020的异名
- Flavobacterium collinsense Zhang et al. 2016
- Flavobacterium collinsii Zamora et al. 2016
- 柱状黄杆菌 Flavobacterium columnare (Bernardet and Grimont 1989) Bernardet et al. 1996
- Flavobacterium commune Ekwe and Kim 2018
- Flavobacterium compostarboris Kim et al. 2012
- Flavobacterium crassostreae Choi et al. 2017
- Flavobacterium croceum Park et al. 2006
- Flavobacterium crocinum Baek et al. 2018
- 黄瓜黄杆菌 Flavobacterium cucumis Weon et al. 2007
- Flavobacterium cupreum Králová et al. 2019
- Flavobacterium cutihirudinis Glaeser et al. 2013
- Flavobacterium cyanobacteriorum Cai et al. 2018
- 大田黄杆菌 Flavobacterium daejeonense Kim et al. 2006
- Flavobacterium daemonense Ngo et al. 2015,也拼作:Flavobacterium daemonensis
- Flavobacterium dankookense Lee et al. 2012
- Flavobacterium dasani Chaudhary et al. 2020
- 污水黄杆菌 Flavobacterium defluvii Park et al. 2007
- 哲拉什黄杆菌 Flavobacterium degerlachei Van Trappen et al. 2004,迪吉氏黄杆菌
- 脱氮黄杆菌 Flavobacterium denitrificans Horn et al. 2005
- Flavobacterium devorans (Zimmermann 1890) Bergey et al. 1923,异名
- Flavobacterium dispersum Chen et al. 2017
- 东滩黄杆菌 Flavobacterium dongtanense Xiao et al. 2011
- Flavobacterium eburneipallidum Jo et al. 2023[2]
- Flavobacterium eburneum Hwang et al. 2017
- Flavobacterium edaphi Chhetri et al. 2019
- Flavobacterium effusum Chen et al. 2018
- Flavobacterium endophyticum Gao et al. 2015
- Flavobacterium enshiense Dong et al. 2013
- Flavobacterium esteraromaticum (Omelianski 1923) Bergey et al. 1930,异名
- 粪黄杆菌 Flavobacterium faecale Kim et al. 2014
- 酵米面黄杆菌 Flavobacterium farinofer-mentans
- Flavobacterium ferrugineum Sickles and Shaw 1934,异名
- 线形黄杆菌 Flavobacterium filum Ryu et al. 2007
- Flavobacterium flaviflagrans Dahal et al. 2017
- Flavobacterium flavigenum Jo et al. 2023[2]
- Flavobacterium flevense (van der Meulen et al. 1974) Bernardet et al. 1996
- Flavobacterium fluminis Ahn et al. 2017
- Flavobacterium fluviale Baek et al. 2020
- Flavobacterium fluviatile Chen et al. 2018
- Flavobacterium fluvii Lee et al. 2010
- Flavobacterium foetidum Bu and Cha 2018
- Flavobacterium fontis Chun et al. 2013
- 冷水黄杆菌 Flavobacterium frigidarium Humphry et al. 2001,寒冷黄杆菌[5]
- 冷海水黄杆菌 Flavobacterium frigidimaris Nogi et al. 2005
- 冷域黄杆菌 Flavobacterium frigoris Van Trappen et al. 2004[6]
- 弗里克塞尔湖黄杆菌 Flavobacterium fryxellicola Van Trappen et al. 2005
- Flavobacterium fulvum Nguyen and Kim 2016
- Flavobacterium gelatinilyticum Jo et al. 2023[2]
- 冰湖黄杆菌 Flavobacterium gelidilacus Van Trappen et al. 2003
- Flavobacterium gillisiae McCammon and Bowman 2000
- Flavobacterium gilvum Shin et al. 2017
- 人参土黄杆菌 Flavobacterium ginsengisoli Kim et al. 2013
- 转化人参皂苷黄杆菌 Flavobacterium ginsenosidimutans Yang et al. 2011
- 冰川黄杆菌 Flavobacterium glaciei Zhang et al. 2006
- 粘黄杆菌 Flavobacterium gleum Holmes et al. 1984,异名
- 大豆黄杆菌 Flavobacterium glycines Madhaiyan et al. 2010
- Flavobacterium gondwanense Dobson et al. 1993,异名
- Flavobacterium gossypii Kämpfer et al. 2017
- 细粒黄杆菌 Flavobacterium granuli Aslam et al. 2005
- Flavobacterium gyeonganense Kim et al. 2014
- Flavobacterium halmophilum Elazari-Volcani 1940,也拼作Flavobacterium halmephilium
- Flavobacterium hankyongi Liu et al. 2018
- 简浩然氏黄杆菌 Flavobacterium haoranii Zhang et al. 2010
- 华农黄杆菌 Flavobacterium hauense Dong et al. 2013,华农产黄细菌
- 肝素黄杆菌 Flavobacterium heparinum Payza and Korn 1956,异名
- 哈茨山黄杆菌 Flavobacterium hercynium Cousin et al. 2007
- 冬天黄杆菌 Flavobacterium hibernum McCammon et al. 1998
- Flavobacterium hibisci Moya et al. 2017
- Flavobacterium hiemivividum Chaudhary et al. 2020
- Flavobacterium humicola Nguyen and Kim 2016
- 匈牙利黄杆菌 Flavobacterium hungaricum Máté et al. 2023[7]
- 水生黄杆菌 Flavobacterium hydatis Bernardet et al. 1996
- Flavobacterium hydrophilum Joung et al. 2019
- Flavobacterium ichthyis Chen et al. 2020
- 印度黄杆菌 Flavobacterium indicum Saha and Chakrabarti, 2006
- 产吲哚黄杆菌 Flavobacterium indologenes Yabuuchi et al. 1983,产吲哚金黄杆菌
- Flavobacterium indoltheticum Campbell and Williams, 1951
- Flavobacterium inkyongense Park et al. 2017
- 济州黄杆菌 Flavobacterium jejuense Park et al. 2016,也拼作:Flavobacterium jejuensis
- 约氏黄杆菌 Flavobacterium johnsoniae (Stanier 1947) Bernardet et al. 1996,约翰逊黄杆菌,也拼作:Flavobacterium johnsonae
- Flavobacterium jumunjinense Joung et al. 2013
- Flavobacterium keumense Ekwe et al. 2017
- Flavobacterium kingsejongi Choi et al. 2018
- Flavobacterium knui Kim et al. 2019
- 朝鲜黄杆菌 Flavobacterium koreense Lee et al. 2012
- Flavobacterium kyungheense Son et al. 2014,也拼作:Flavobacterium kyungheensis
- Flavobacterium lacicola Park et al. 2018
- Flavobacterium lacisediminis Zhang et al. 2023[8]
- Flavobacterium lacunae Chen et al. 2017
- 湖黄杆菌 Flavobacterium lacus Li et al. 2014
- Flavobacterium lacustre Jo et al. 2023[2]
- Flavobacterium laiguense Yang et al. 2019
- Flavobacterium limi Moya et al. 2017
- 栖污泥黄杆菌 Flavobacterium limicola Tamaki et al. 2003
- Flavobacterium limnophilum Jo et al. 2023[2]
- Flavobacterium limnosediminis Lee et al. 2013
- 耐林丹黄杆菌 Flavobacterium lindanitolerans Jit et al. 2008
- Flavobacterium longum Fujii et al. 2014
- Flavobacterium luteolum Jo et al. 2023[2]
- Flavobacterium luteum Park et al. 2017
- 解污泥黄杆菌 Flavobacterium luticocti Liu et al. 2017
- 活性污泥黄杆菌 Flavobacterium lutivivi Feng et al. 2016
- Flavobacterium macacae Li et al. 2020
- Flavobacterium macrobrachii Sheu et al. 2011
- Flavobacterium magnum Baek et al. 2018
- 茅台黄杆菌 Flavobacterium maotaiense Feng et al. 2015
- Flavobacterium marginilacus Jo et al. 2023[2]
- Flavobacterium marinotypicum ZoBell and Upham 1944,异名
- 海黄杆菌 Flavobacterium marinum Song et al. 2013,异名
- Flavobacterium maris Romanenko et al. 2016
- 脑膜炎黄杆菌 Flavobacterium meningosepticum King 1959,异名
- Flavobacterium microcysteis Seo et al. 2020
- 密克罗黄杆菌 Flavobacterium micromati Van Trappen et al. 2004
- 噬果胶黄杆菌 Flavobacterium mizutaii (Yabuuchi et al. 1983) Holmes et al. 1988,异名,也称水氏黄杆菌、水生黄杆菌
- Flavobacterium multivorum Holmes et al. 1981,异名
- Flavobacterium myungsuense Joung et al. 2012
- Flavobacterium nackdongense Kim and Yu 2020
- Flavobacterium naphthae Chaudhary and Kim 2018
- Flavobacterium nitratireducens Nupur et al. 2013
- Flavobacterium nitrogenifigens Kämpfer et al. 2015
- Flavobacterium niveum Chen et al. 2019
- 难沉黄杆菌 Flavobacterium noncentrifugens Zhu et al. 2013,不聚中黄杆菌
- Flavobacterium notoginsengisoli Zhang et al. 2016
- 海泥黄杆菌 Flavobacterium oceanosedimentum Carty and Litchfield 1978
- 气味黄杆菌 Flavobacterium odoratum Stutzer 1929,为Flavobacterium Bergey et al. 1923的异名,也称芳香黄杆菌
- Flavobacterium okayamense Kitahara et al. 2023[9]
- Flavobacterium okeanokoites ZoBell and Upham 1944,为Planococcus okeanokoites (ZoBell and Upham 1944) Nakagawa et al. 1996的异名
- Flavobacterium olei Chaudhary and Kim 2017
- 广食黄杆菌 Flavobacterium omnivorum Zhu et al. 2003
- Flavobacterium oncorhynchi Zamora et al. 2012
- 东方黄杆菌 Flavobacterium orientale Li et al. 2017
- 稻黄杆菌 Flavobacterium oryzae Chen et al. 2014
- Flavobacterium ovatum Ren et al. 2018
- Flavobacterium pallidum Baek et al. 2018
- 沼泽黄杆菌 Flavobacterium palustre Feng et al. 2015
- Flavobacterium panacagri Kim et al. 2023[10]
- Flavobacterium panici Kämpfer et al. 2020
- Flavobacterium paronense Joung et al. 2016
- 噬果胶黄杆菌 Flavobacterium pectinovorum (Reichenbach 1989) Bernardet et al. 1996
- Flavobacterium pedocola Nguyen and Kim 2016
- Flavobacterium phocarum Zhou et al. 2018
- 芦苇黄杆菌 Flavobacterium phragmitis Liu et al. 2011
- Flavobacterium piscinae Chen et al. 2019
- 双鱼黄杆菌 Flavobacterium piscis Zamora et al. 2014
- Flavobacterium plurextorum Zamora et al. 2014
- 海黄杆菌 Flavobacterium ponti Yoon et al. 2011,海洋黄杆菌
- Flavobacterium praedii Jo et al. 2023[2]
- 长黄杆菌 Flavobacterium procerum Feng et al. 2015
- 深海黄杆菌 Flavobacterium profundi Wang et al. 2020
- 冷湖黄杆菌 Flavobacterium psychrolimnae Van Trappen et al. 2005
- Flavobacterium psychrophilum (Bernardet and Grimont 1989) Bernardet et al. 1996
- Flavobacterium psychroterrae Králová et al. 2018
- Flavobacterium psychrotrophum Kim et al. 2023[11]
- Flavobacterium psychrotolerans Yang et al. 2020
- 羌塘黄杆菌 Flavobacterium qiangtangense Huang et al. 2015,也拼作:Flavobacterium qiangtangensis
- Flavobacterium quisquiliarum Zhang et al. 2017
- Flavobacterium rakeshii Kaur et al. 2012
- Flavobacterium ranwuense Zhang et al. 2019
- 雷氏黄杆菌 Flavobacterium reichenbachii Ali et al. 2009,赖欣巴哈氏黄杆菌
- Flavobacterium resinovorum Delaporte and Daste 1956,为Novosphingobium resinovorum (Delaporte and Daste 1956) Lim et al. 2007的异名
- 耐抗黄杆菌 Flavobacterium resistens Ryu et al. 2008
- Flavobacterium restrictum Zhang et al. 2020
- Flavobacterium rhamnosiphilum Zhang et al. 2020
- Flavobacterium riviphilum Sheu et al. 2018
- 小河黄杆菌 Flavobacterium rivuli Ali et al. 2009
- 嗜糖黄杆菌 Flavobacterium saccharophilum (Reichenbach 1989) Bernardet et al. 1996
- Flavobacterium salegens Dobson et al. 1993,为Salegentibacter salegens (Dobson et al. 1993) McCammon and Bowman 2000的异名
- 盐湖黄杆菌 Flavobacterium salilacus Debnath et al. 2020
- 盐湖黄杆菌高地亚种 Flavobacterium salilacus altitudinum
- 盐帽黄杆菌 Flavobacterium saliperosum Wang et al. 2006
- Flavobacterium salmonis Kämpfer et al. 2020
- Flavobacterium sandaracinum Chaudhary et al. 2020
- 沙上黄杆菌 Flavobacterium sasangense
- Flavobacterium scophthalmum Mudarris et al. 1994,为Chryseobacterium scophthalmum (Mudarris et al. 1994) Vandamme et al. 1994的异名
- Flavobacterium sedimenticola Wu et al. 2023[12]
- 海滨沉积物黄杆菌 Flavobacterium sediminilitoris Park et al. 2018
- 沉积物黄杆菌 Flavobacterium sediminis Bae et al. 2018
- 泥土黄杆菌 Flavobacterium segetis Yi et Chun, 2006
- Flavobacterium seoulense Shin et al. 2015
- Flavobacterium sharifuzzamanii Debnath et al. 2019
- Flavobacterium silvisoli Chaudhary et al. 2019
- 中华耐冷黄杆菌 Flavobacterium sinopsychrotolerans Xu et al. 2011
- 土壤黄杆菌 Flavobacterium soli Yoon et al. 2006
- Flavobacterium soyangense Nam et al. 2017
- Flavobacterium spartansii Loch and Faisal 2014
- Flavobacterium spiritivorum Holmes et al. 1982,为Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983的异名
- Flavobacterium squillarum Sheu et al. 2013
- Flavobacterium stagni Chen et al. 2019
- 碱蓬黄杆菌 Flavobacterium suaedae Sun et al. 2016
- 下萨克森州黄杆菌 Flavobacterium subsaxonicum Ali et al. 2009
- 琥珀酸黄杆菌 Flavobacterium succinicans (Reichenbach 1989) Bernardet et al. 1996,琥珀黄杆菌
- Flavobacterium sufflavum Chen et al. 2019
- 顺天黄杆菌 Flavobacterium suncheonense Kim et al. 2006
- Flavobacterium supellecticarium Lin et al. 2020
- 苏州黄杆菌 Flavobacterium suzhouense Zhang et al. 2015
- Flavobacterium swingsii Ali et al. 2009
- Flavobacterium tangerina Li et al. 2020
- Flavobacterium tangerinum Li et al. 2020
- 栖菌垫黄杆菌 Flavobacterium tegetincola McCammon and Bowman 2000
- Flavobacterium terrae Weon et al. 2007
- Flavobacterium terrigena Yoon et al. 2007
- Flavobacterium terriphilum Zhang et al. 2016
- Flavobacterium thalpophilum Holmes et al. 1983
- 热黄杆菌 Flavobacterium thermophilum Loginova and Egorova 1982
- 天格尔黄杆菌 Flavobacterium tiangeerense Xin et al. 2009
- 西藏黄杆菌 Flavobacterium tibetense Phurbu et al. 2019
- Flavobacterium tilapiae Chen et al. 2013
- Flavobacterium tistrianum Suwannachart et al. 2016
- Flavobacterium tructae Zamora et al. 2014
- Flavobacterium tyrosinilyticum Du and Yi 2016
- Flavobacterium uliginosum ZoBell and Upham 1944,为Zobellia uliginosa (ZoBell and Upham 1944) Barbeyron et al. 2001的异名
- Flavobacterium ummariense Lata et al. 2012
- Flavobacterium ureilyticum Dahal and Kim 2019
- Flavobacterium urocaniciphilum Fujii et al. 2014
- 乌鲁木齐黄杆菌 Flavobacterium urumqiense Dong et al. 2012
- Flavobacterium ustbae Liu et al. 2019
- Flavobacterium verecundum Sheu et al. 2016
- Flavobacterium vireti Singh et al. 2015
- Flavobacterium viscosum Li et al. 2020,也拼作:Flavobacterium viscosus
- 威弗半岛黄杆菌 Flavobacterium weaverense Yi and Chun 2006
- 黄色黄杆菌 Flavobacterium xanthum (ex Inoue and Komagata 1976) McCammon and Bowman 2000
- 新疆黄杆菌 Flavobacterium xinjiangense Zhu et al. 2003
- 雪山黄杆菌 Flavobacterium xueshanense Dong et al. 2012
- 藪内氏黄杆菌 Flavobacterium yabuuchiae Holmes et al. 1988,为Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983的异名
- Flavobacterium yafengii Yin et al. 2023[13]
- Flavobacterium yanchengense Hu et al. 2013
- Flavobacterium yonginense Joung et al. 2012
- Flavobacterium zepuense Zhang et al. 2020[14]
- Flavobacterium zhairuonense Debnath et al. 2020,也拼作Flavobacterium zhairuonensis
參考資料
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- LPSN - List of Prokaryotic names with Standing in Nomenclature
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