黄杆菌属

黄杆菌属学名:)為黄杆菌目黄杆菌科的一好氧或兼性厌氧发酵型革兰氏阴性杆菌。直杆状,端圆。广泛分布在土壤和水中,在生肉、乳类和其他食物以及医院环境和人类的临床标本中都有检出。此属的模式种为水生黄杆菌(Flavobacterium aquatile)。

黄杆菌属
科学分类 编辑
域: 细菌域 Bacteria
界: 细菌界 Bacteria
门: 擬桿菌門 Bacteroidota
纲: 擬桿菌綱 Bacteroidia
目: 黄杆菌目 Flavobacteriales
科: 黄杆菌科 Flavobacteriaceae
属: 黄杆菌属 Flavobacterium
Bergey et al,1923
模式種
水生黄杆菌
Flavobacterium aquatile
(Frankland and Frankland 1889) Bergey et al. 1923
異名

Bacillus aquatilis Frankland and Frankland 1889

下属物种

本属包括以下物种:[1]

  • Flavobacterium acidificum Steinhaus 1941
  • Flavobacterium aciduliphilum Kang et al. 2013
  • Flavobacterium acidurans Millar 1973
  • Flavobacterium aestivum Jo et al. 2023[2]
  • Flavobacterium aquiphilum Jo et al. 2023[2]
  • Flavobacterium ahnfeltiae Nedashkovskaya et al. 2015
  • 栖阿卡亚黄杆菌 Flavobacterium akiainvivens Kuo et al. 2013
  • Flavobacterium album Baek et al. 2018
  • 居藻黄杆菌 Flavobacterium algicola Miyashita et al. 2010
  • Flavobacterium algoritolerans Yin et al. 2023[3]
  • Flavobacterium alkalisoli Xu et al. 2020[4]
  • Flavobacterium alvei Lee and Jeon 2018
  • Flavobacterium amnicola Sheu et al. 2019
  • Flavobacterium amnigenum Patil et al. 2019
  • Flavobacterium amniphilum Sheu et al. 2017
  • 安纳托利亚黄杆菌 Flavobacterium anatoliense Kacagan et al. 2013,异名
  • 安徽黄杆菌 Flavobacterium anhuiense Liu et al. 2008
  • 橙黄徽黄杆菌 Flavobacterium antarcticum Yi et al. 2005
  • Flavobacterium aquariorum Joung et al. 2020
  • Flavobacterium aquaticum Subhash et al. 2013
  • 水生黄杆菌 Flavobacterium aquatile (Frankland and Frankland 1889) Bergey et al. 1923
  • Flavobacterium aquicola Hatayama et al. 2016
  • 硬水黄杆菌 Flavobacterium aquidurense Cousin et al. 2007
  • Flavobacterium aquimarinum Kristyanto et al. 2018
  • Flavobacterium araucananum Kämpfer et al. 2012
  • Flavobacterium arcticum Li et al. 2017
  • Flavobacterium ardleyense Zhou et al. 2017
  • 芳香黄杆菌 Flavobacterium aromatium
  • Flavobacterium arsenatis Ao et al. 2014
  • Flavobacterium arsenitoxidans Khianngam et al. 2015
  • Flavobacterium artemisiae Zhao et al. 2018
  • Flavobacterium aurantiibacter Cai et al. 2018
  • Flavobacterium autothermophilum Goto et al. 1978
  • 大比目鱼黄杆菌 Flavobacterium balustinum Harrison 1929,异名
  • Flavobacterium banpakuense Kim et al. 2011
  • 北部湾黄杆菌 Flavobacterium beibuense Fu et al. 2011
  • Flavobacterium bizetiae Mühle et al. 2021
  • Flavobacterium bomense Liu et al. 2019,也拼作:Flavobacterium bomensis
  • Flavobacterium branchiarum Zamora et al. 2016
  • Flavobacterium branchiicola Zamora et al. 2016
  • 嗜枝黄杆菌 Flavobacterium branchiophilum Wakabayashi et al. 1989,嗜鳍黄杆菌,也拼作Flavobacterium branchiophila
  • 短黄杆菌 Flavobacterium breve (ex Lustig 1890) Holmes and Owen 1982,异名
  • Flavobacterium brevivitae Chen et al. 2016
  • 北京化工大学黄杆菌 Flavobacterium buctense Feng et al. 2016
  • 淤泥黄杆菌 Flavobacterium caeni Liu et al. 2010
  • Flavobacterium capsulatum Leifson 1962,为Novosphingobium capsulatum (Leifson 1962) Takeuchi et al. 2001的异名
  • Flavobacterium caseinilyticum Chaudhary et al. 2020
  • Flavobacterium cauense Qu et al. 2009
  • Flavobacterium cellulosilyticum Chaudhary et al. 2020
  • Flavobacterium cerinum Zhang et al. 2019
  • 鲸黄杆菌 Flavobacterium ceti Vela et al. 2007,为Myroides ceti (Vela et al. 2007) García-López et al. 2020的异名
  • 陈氏黄杆菌 Flavobacterium cheniae Qu et al. 2008,陈文新氏黄杆菌,以陈文新的名字命名
  • Flavobacterium cheonanense Lee et al. 2012
  • Flavobacterium cheongpyeongense Joung et al. 2019
  • Flavobacterium cheonhonense Lee et al. 2014
  • Flavobacterium chilense Kämpfer et al. 2012
  • Flavobacterium chryseum Králová et al. 2018
  • Flavobacterium chuncheonense Park et al. 2017
  • Flavobacterium chungangense Kim et al. 2009
  • Flavobacterium chungbukense Lim et al. 2011
  • Flavobacterium chungnamense Lee et al. 2012
  • Flavobacterium circumlabens Králová et al. 2019
  • Flavobacterium cloacae Liu et al. 2017,为Myroides cloacae (Liu et al. 2017) García-López et al. 2020的异名
  • Flavobacterium collinsense Zhang et al. 2016
  • Flavobacterium collinsii Zamora et al. 2016
  • 柱状黄杆菌 Flavobacterium columnare (Bernardet and Grimont 1989) Bernardet et al. 1996
  • Flavobacterium commune Ekwe and Kim 2018
  • Flavobacterium compostarboris Kim et al. 2012
  • Flavobacterium crassostreae Choi et al. 2017
  • Flavobacterium croceum Park et al. 2006
  • Flavobacterium crocinum Baek et al. 2018
  • 黄瓜黄杆菌 Flavobacterium cucumis Weon et al. 2007
  • Flavobacterium cupreum Králová et al. 2019
  • Flavobacterium cutihirudinis Glaeser et al. 2013
  • Flavobacterium cyanobacteriorum Cai et al. 2018
  • 大田黄杆菌 Flavobacterium daejeonense Kim et al. 2006
  • Flavobacterium daemonense Ngo et al. 2015,也拼作:Flavobacterium daemonensis
  • Flavobacterium dankookense Lee et al. 2012
  • Flavobacterium dasani Chaudhary et al. 2020
  • 污水黄杆菌 Flavobacterium defluvii Park et al. 2007
  • 哲拉什黄杆菌 Flavobacterium degerlachei Van Trappen et al. 2004,迪吉氏黄杆菌
  • 脱氮黄杆菌 Flavobacterium denitrificans Horn et al. 2005
  • Flavobacterium devorans (Zimmermann 1890) Bergey et al. 1923,异名
  • Flavobacterium dispersum Chen et al. 2017
  • 东滩黄杆菌 Flavobacterium dongtanense Xiao et al. 2011
  • Flavobacterium eburneipallidum Jo et al. 2023[2]
  • Flavobacterium eburneum Hwang et al. 2017
  • Flavobacterium edaphi Chhetri et al. 2019
  • Flavobacterium effusum Chen et al. 2018
  • Flavobacterium endophyticum Gao et al. 2015
  • Flavobacterium enshiense Dong et al. 2013
  • Flavobacterium esteraromaticum (Omelianski 1923) Bergey et al. 1930,异名
  • 粪黄杆菌 Flavobacterium faecale Kim et al. 2014
  • 酵米面黄杆菌 Flavobacterium farinofer-mentans
  • Flavobacterium ferrugineum Sickles and Shaw 1934,异名
  • 线形黄杆菌 Flavobacterium filum Ryu et al. 2007
  • Flavobacterium flaviflagrans Dahal et al. 2017
  • Flavobacterium flavigenum Jo et al. 2023[2]
  • Flavobacterium flevense (van der Meulen et al. 1974) Bernardet et al. 1996
  • Flavobacterium fluminis Ahn et al. 2017
  • Flavobacterium fluviale Baek et al. 2020
  • Flavobacterium fluviatile Chen et al. 2018
  • Flavobacterium fluvii Lee et al. 2010
  • Flavobacterium foetidum Bu and Cha 2018
  • Flavobacterium fontis Chun et al. 2013
  • 冷水黄杆菌 Flavobacterium frigidarium Humphry et al. 2001,寒冷黄杆菌[5]
  • 冷海水黄杆菌 Flavobacterium frigidimaris Nogi et al. 2005
  • 冷域黄杆菌 Flavobacterium frigoris Van Trappen et al. 2004[6]
  • 弗里克塞尔湖黄杆菌 Flavobacterium fryxellicola Van Trappen et al. 2005
  • Flavobacterium fulvum Nguyen and Kim 2016
  • Flavobacterium gelatinilyticum Jo et al. 2023[2]
  • 冰湖黄杆菌 Flavobacterium gelidilacus Van Trappen et al. 2003
  • Flavobacterium gillisiae McCammon and Bowman 2000
  • Flavobacterium gilvum Shin et al. 2017
  • 人参土黄杆菌 Flavobacterium ginsengisoli Kim et al. 2013
  • 转化人参皂苷黄杆菌 Flavobacterium ginsenosidimutans Yang et al. 2011
  • 冰川黄杆菌 Flavobacterium glaciei Zhang et al. 2006
  • 粘黄杆菌 Flavobacterium gleum Holmes et al. 1984,异名
  • 大豆黄杆菌 Flavobacterium glycines Madhaiyan et al. 2010
  • Flavobacterium gondwanense Dobson et al. 1993,异名
  • Flavobacterium gossypii Kämpfer et al. 2017
  • 细粒黄杆菌 Flavobacterium granuli Aslam et al. 2005
  • Flavobacterium gyeonganense Kim et al. 2014
  • Flavobacterium halmophilum Elazari-Volcani 1940,也拼作Flavobacterium halmephilium
  • Flavobacterium hankyongi Liu et al. 2018
  • 简浩然氏黄杆菌 Flavobacterium haoranii Zhang et al. 2010
  • 华农黄杆菌 Flavobacterium hauense Dong et al. 2013,华农产黄细菌
  • 肝素黄杆菌 Flavobacterium heparinum Payza and Korn 1956,异名
  • 哈茨山黄杆菌 Flavobacterium hercynium Cousin et al. 2007
  • 冬天黄杆菌 Flavobacterium hibernum McCammon et al. 1998
  • Flavobacterium hibisci Moya et al. 2017
  • Flavobacterium hiemivividum Chaudhary et al. 2020
  • Flavobacterium humicola Nguyen and Kim 2016
  • 匈牙利黄杆菌 Flavobacterium hungaricum Máté et al. 2023[7]
  • 水生黄杆菌 Flavobacterium hydatis Bernardet et al. 1996
  • Flavobacterium hydrophilum Joung et al. 2019
  • Flavobacterium ichthyis Chen et al. 2020
  • 印度黄杆菌 Flavobacterium indicum Saha and Chakrabarti, 2006
  • 产吲哚黄杆菌 Flavobacterium indologenes Yabuuchi et al. 1983,产吲哚金黄杆菌
  • Flavobacterium indoltheticum Campbell and Williams, 1951
  • Flavobacterium inkyongense Park et al. 2017
  • 济州黄杆菌 Flavobacterium jejuense Park et al. 2016,也拼作:Flavobacterium jejuensis
  • 约氏黄杆菌 Flavobacterium johnsoniae (Stanier 1947) Bernardet et al. 1996,约翰逊黄杆菌,也拼作:Flavobacterium johnsonae
  • Flavobacterium jumunjinense Joung et al. 2013
  • Flavobacterium keumense Ekwe et al. 2017
  • Flavobacterium kingsejongi Choi et al. 2018
  • Flavobacterium knui Kim et al. 2019
  • 朝鲜黄杆菌 Flavobacterium koreense Lee et al. 2012
  • Flavobacterium kyungheense Son et al. 2014,也拼作:Flavobacterium kyungheensis
  • Flavobacterium lacicola Park et al. 2018
  • Flavobacterium lacisediminis Zhang et al. 2023[8]
  • Flavobacterium lacunae Chen et al. 2017
  • 湖黄杆菌 Flavobacterium lacus Li et al. 2014
  • Flavobacterium lacustre Jo et al. 2023[2]
  • Flavobacterium laiguense Yang et al. 2019
  • Flavobacterium limi Moya et al. 2017
  • 栖污泥黄杆菌 Flavobacterium limicola Tamaki et al. 2003
  • Flavobacterium limnophilum Jo et al. 2023[2]
  • Flavobacterium limnosediminis Lee et al. 2013
  • 耐林丹黄杆菌 Flavobacterium lindanitolerans Jit et al. 2008
  • Flavobacterium longum Fujii et al. 2014
  • Flavobacterium luteolum Jo et al. 2023[2]
  • Flavobacterium luteum Park et al. 2017
  • 解污泥黄杆菌 Flavobacterium luticocti Liu et al. 2017
  • 活性污泥黄杆菌 Flavobacterium lutivivi Feng et al. 2016
  • Flavobacterium macacae Li et al. 2020
  • Flavobacterium macrobrachii Sheu et al. 2011
  • Flavobacterium magnum Baek et al. 2018
  • 茅台黄杆菌 Flavobacterium maotaiense Feng et al. 2015
  • Flavobacterium marginilacus Jo et al. 2023[2]
  • Flavobacterium marinotypicum ZoBell and Upham 1944,异名
  • 海黄杆菌 Flavobacterium marinum Song et al. 2013,异名
  • Flavobacterium maris Romanenko et al. 2016
  • 脑膜炎黄杆菌 Flavobacterium meningosepticum King 1959,异名
  • Flavobacterium microcysteis Seo et al. 2020
  • 密克罗黄杆菌 Flavobacterium micromati Van Trappen et al. 2004
  • 噬果胶黄杆菌 Flavobacterium mizutaii (Yabuuchi et al. 1983) Holmes et al. 1988,异名,也称水氏黄杆菌、水生黄杆菌
  • Flavobacterium multivorum Holmes et al. 1981,异名
  • Flavobacterium myungsuense Joung et al. 2012
  • Flavobacterium nackdongense Kim and Yu 2020
  • Flavobacterium naphthae Chaudhary and Kim 2018
  • Flavobacterium nitratireducens Nupur et al. 2013
  • Flavobacterium nitrogenifigens Kämpfer et al. 2015
  • Flavobacterium niveum Chen et al. 2019
  • 难沉黄杆菌 Flavobacterium noncentrifugens Zhu et al. 2013,不聚中黄杆菌
  • Flavobacterium notoginsengisoli Zhang et al. 2016
  • 海泥黄杆菌 Flavobacterium oceanosedimentum Carty and Litchfield 1978
  • 气味黄杆菌 Flavobacterium odoratum Stutzer 1929,为Flavobacterium Bergey et al. 1923的异名,也称芳香黄杆菌
  • Flavobacterium okayamense Kitahara et al. 2023[9]
  • Flavobacterium okeanokoites ZoBell and Upham 1944,为Planococcus okeanokoites (ZoBell and Upham 1944) Nakagawa et al. 1996的异名
  • Flavobacterium olei Chaudhary and Kim 2017
  • 广食黄杆菌 Flavobacterium omnivorum Zhu et al. 2003
  • Flavobacterium oncorhynchi Zamora et al. 2012
  • 东方黄杆菌 Flavobacterium orientale Li et al. 2017
  • 稻黄杆菌 Flavobacterium oryzae Chen et al. 2014
  • Flavobacterium ovatum Ren et al. 2018
  • Flavobacterium pallidum Baek et al. 2018
  • 沼泽黄杆菌 Flavobacterium palustre Feng et al. 2015
  • Flavobacterium panacagri Kim et al. 2023[10]
  • Flavobacterium panici Kämpfer et al. 2020
  • Flavobacterium paronense Joung et al. 2016
  • 噬果胶黄杆菌 Flavobacterium pectinovorum (Reichenbach 1989) Bernardet et al. 1996
  • Flavobacterium pedocola Nguyen and Kim 2016
  • Flavobacterium phocarum Zhou et al. 2018
  • 芦苇黄杆菌 Flavobacterium phragmitis Liu et al. 2011
  • Flavobacterium piscinae Chen et al. 2019
  • 双鱼黄杆菌 Flavobacterium piscis Zamora et al. 2014
  • Flavobacterium plurextorum Zamora et al. 2014
  • 海黄杆菌 Flavobacterium ponti Yoon et al. 2011,海洋黄杆菌
  • Flavobacterium praedii Jo et al. 2023[2]
  • 长黄杆菌 Flavobacterium procerum Feng et al. 2015
  • 深海黄杆菌 Flavobacterium profundi Wang et al. 2020
  • 冷湖黄杆菌 Flavobacterium psychrolimnae Van Trappen et al. 2005
  • Flavobacterium psychrophilum (Bernardet and Grimont 1989) Bernardet et al. 1996
  • Flavobacterium psychroterrae Králová et al. 2018
  • Flavobacterium psychrotrophum Kim et al. 2023[11]
  • Flavobacterium psychrotolerans Yang et al. 2020
  • 羌塘黄杆菌 Flavobacterium qiangtangense Huang et al. 2015,也拼作:Flavobacterium qiangtangensis
  • Flavobacterium quisquiliarum Zhang et al. 2017
  • Flavobacterium rakeshii Kaur et al. 2012
  • Flavobacterium ranwuense Zhang et al. 2019
  • 雷氏黄杆菌 Flavobacterium reichenbachii Ali et al. 2009,赖欣巴哈氏黄杆菌
  • Flavobacterium resinovorum Delaporte and Daste 1956,为Novosphingobium resinovorum (Delaporte and Daste 1956) Lim et al. 2007的异名
  • 耐抗黄杆菌 Flavobacterium resistens Ryu et al. 2008
  • Flavobacterium restrictum Zhang et al. 2020
  • Flavobacterium rhamnosiphilum Zhang et al. 2020
  • Flavobacterium riviphilum Sheu et al. 2018
  • 小河黄杆菌 Flavobacterium rivuli Ali et al. 2009
  • 嗜糖黄杆菌 Flavobacterium saccharophilum (Reichenbach 1989) Bernardet et al. 1996
  • Flavobacterium salegens Dobson et al. 1993,为Salegentibacter salegens (Dobson et al. 1993) McCammon and Bowman 2000的异名
  • 盐湖黄杆菌 Flavobacterium salilacus Debnath et al. 2020
    • 盐湖黄杆菌高地亚种 Flavobacterium salilacus altitudinum
  • 盐帽黄杆菌 Flavobacterium saliperosum Wang et al. 2006
  • Flavobacterium salmonis Kämpfer et al. 2020
  • Flavobacterium sandaracinum Chaudhary et al. 2020
  • 沙上黄杆菌 Flavobacterium sasangense
  • Flavobacterium scophthalmum Mudarris et al. 1994,为Chryseobacterium scophthalmum (Mudarris et al. 1994) Vandamme et al. 1994的异名
  • Flavobacterium sedimenticola Wu et al. 2023[12]
  • 海滨沉积物黄杆菌 Flavobacterium sediminilitoris Park et al. 2018
  • 沉积物黄杆菌 Flavobacterium sediminis Bae et al. 2018
  • 泥土黄杆菌 Flavobacterium segetis Yi et Chun, 2006
  • Flavobacterium seoulense Shin et al. 2015
  • Flavobacterium sharifuzzamanii Debnath et al. 2019
  • Flavobacterium silvisoli Chaudhary et al. 2019
  • 中华耐冷黄杆菌 Flavobacterium sinopsychrotolerans Xu et al. 2011
  • 土壤黄杆菌 Flavobacterium soli Yoon et al. 2006
  • Flavobacterium soyangense Nam et al. 2017
  • Flavobacterium spartansii Loch and Faisal 2014
  • Flavobacterium spiritivorum Holmes et al. 1982,为Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983的异名
  • Flavobacterium squillarum Sheu et al. 2013
  • Flavobacterium stagni Chen et al. 2019
  • 碱蓬黄杆菌 Flavobacterium suaedae Sun et al. 2016
  • 下萨克森州黄杆菌 Flavobacterium subsaxonicum Ali et al. 2009
  • 琥珀酸黄杆菌 Flavobacterium succinicans (Reichenbach 1989) Bernardet et al. 1996,琥珀黄杆菌
  • Flavobacterium sufflavum Chen et al. 2019
  • 顺天黄杆菌 Flavobacterium suncheonense Kim et al. 2006
  • Flavobacterium supellecticarium Lin et al. 2020
  • 苏州黄杆菌 Flavobacterium suzhouense Zhang et al. 2015
  • Flavobacterium swingsii Ali et al. 2009
  • Flavobacterium tangerina Li et al. 2020
  • Flavobacterium tangerinum Li et al. 2020
  • 栖菌垫黄杆菌 Flavobacterium tegetincola McCammon and Bowman 2000
  • Flavobacterium terrae Weon et al. 2007
  • Flavobacterium terrigena Yoon et al. 2007
  • Flavobacterium terriphilum Zhang et al. 2016
  • Flavobacterium thalpophilum Holmes et al. 1983
  • 热黄杆菌 Flavobacterium thermophilum Loginova and Egorova 1982
  • 天格尔黄杆菌 Flavobacterium tiangeerense Xin et al. 2009
  • 西藏黄杆菌 Flavobacterium tibetense Phurbu et al. 2019
  • Flavobacterium tilapiae Chen et al. 2013
  • Flavobacterium tistrianum Suwannachart et al. 2016
  • Flavobacterium tructae Zamora et al. 2014
  • Flavobacterium tyrosinilyticum Du and Yi 2016
  • Flavobacterium uliginosum ZoBell and Upham 1944,为Zobellia uliginosa (ZoBell and Upham 1944) Barbeyron et al. 2001的异名
  • Flavobacterium ummariense Lata et al. 2012
  • Flavobacterium ureilyticum Dahal and Kim 2019
  • Flavobacterium urocaniciphilum Fujii et al. 2014
  • 乌鲁木齐黄杆菌 Flavobacterium urumqiense Dong et al. 2012
  • Flavobacterium ustbae Liu et al. 2019
  • Flavobacterium verecundum Sheu et al. 2016
  • Flavobacterium vireti Singh et al. 2015
  • Flavobacterium viscosum Li et al. 2020,也拼作:Flavobacterium viscosus
  • 威弗半岛黄杆菌 Flavobacterium weaverense Yi and Chun 2006
  • 黄色黄杆菌 Flavobacterium xanthum (ex Inoue and Komagata 1976) McCammon and Bowman 2000
  • 新疆黄杆菌 Flavobacterium xinjiangense Zhu et al. 2003
  • 雪山黄杆菌 Flavobacterium xueshanense Dong et al. 2012
  • 藪内氏黄杆菌 Flavobacterium yabuuchiae Holmes et al. 1988,为Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983的异名
  • Flavobacterium yafengii Yin et al. 2023[13]
  • Flavobacterium yanchengense Hu et al. 2013
  • Flavobacterium yonginense Joung et al. 2012
  • Flavobacterium zepuense Zhang et al. 2020[14]
  • Flavobacterium zhairuonense Debnath et al. 2020,也拼作Flavobacterium zhairuonensis

參考資料

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  • LPSN - List of Prokaryotic names with Standing in Nomenclature
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